One of the main SRMAtlas storage disk arrays has failed. The disk array is being rebuilt and all data must be restored from backup tape. This process is expected to be complete by January 24, 2020. Until then, you can continue to query for transitions, but some individual QTOF spectra and are unavailable for viewing until the data are restored. We apologize for the problem.
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SRMAtlas Bibliography



Ulrike Kusebauch, David S. Campbell, Eric W. Deutsch, Caroline S. Chu, Douglas A. Spicer, Mi-Youn Brusniak, Joseph Slagel, Zhi Sun, Jeffrey Stevens, Barbara Grimes, David Shteynberg, Michael R. Hoopmann, Peter Blattmann, Alexander V. Ratushny, Oliver Rinner, Paola Picotti, Christine Carapito, Chung-Ying Huang, Meghan Kapousouz, Henry Lam, Tommy Tran, Emek Demir, John D. Aitchison, Chris Sander, Leroy Hood, Ruedi Aebersold, Robert L. Moritz
Human SRMAtlas: A resource of targeted assays to quantify the complete human proteome
Cell 2016, 166(3), 766-778
PMID: 27453469
DOI: 10.1016/j.cell.2016.06.041

Olga T. Schubert, Jeppe Mouritsen, Christina Ludwig, Hannes L. Röst, George Rosenberger, Patrick K. Arthur, Manfred Claassen, David S. Campbell, Zhi Sun, Terry Farrah, Martin Gengenbacher, Alessio Maiolica, Stefan H.E.
The Mtb Proteome Library: A Resource of Assays to Quantify the Complete Proteome of Mycobacterium tuberculosis
Cell Host & Microbe 2013, 13(5), 602-612
PMID: 23684311
DOI: 10.1016/j.chom.2013.04.008

Ruth Hüttenhain, Silvia Surinova, Reto Ossola, Zhi Sun, David Campbell, Ferdinando Cerciello, Ralph Schiess, Damaris Bausch-Fluck, George Rosenberger, Jingchung Chen, Oliver Rinner, Ulrike Kusebauch, Marián Hajdúch, Robert L. Moritz, Bernd Wollscheid, and Ruedi Aebersold
N-Glycoprotein SRMAtlas: A Resource of Mass Spectrometric Assays for N-glycosites Enabling Consistent and Multiplexed Protein Quantification for Clinical Applications
Molecular & Cellular Proteomics 2013, 12(4), 1005-1016
PMID: 23408683
DOI: 10.1074/mcp.O112.026617

Paola Picotti, Mathieu Clément-Ziza, Henry Lam, David S. Campbell, Alexander Schmidt, Eric W. Deutsch, Hannes Röst, Zhi Sun, Oliver Rinner, Lukas Reiter, Qin Shen, Jacob J. Michaelson, Andreas Frei, Simon Alberti, Ulrike Kusebauch, Bernd Wollscheid, Robert L. Moritz, Andreas Beyer & Ruedi Aebersold
A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis
Nature 2013, 494(7436), 266-270
PMID: 23334424
DOI: 10.1038/nature11835

Paola Picotti, Henry Lam, David Campbell, Eric W. Deutsch, Hamid Mirzaei, Jeff Ranish, Bruno Domon and Ruedi Aebersold
A database of mass spectrometric assays for the yeast proteome
Nature Methods 2008, 5(11), 913-914.
PMID: 18974732
DOI: 10.1038/nmeth1108-913


Related Publications
Frank Desiere, Eric W. Deutsch, Alexey I. Nesvizhskii, Parag Mallick, Nichole King, Jimmy K. Eng, Alan Aderem, Rose Boyle, Erich Brunner, Samuel Donohoe, Nelson Fausto, Ernst Hafen, Lee Hood, Michael G. Katze, Kathleen Kennedy, Floyd Kregenow, Hookeun Lee, Biaoyang Lin, Dan Martin, Jeff Ranish, David J. Rawlings, Lawrence E. Samelson, Yuzuru Shiio, Julian Watts, Bernd Wollscheid, Michael E. Wright, Wei Yan, Lihong Yang, Eugene Yi, Hui Zhang and Ruedi Aebersold
Integration of Peptide Sequences Obtained by High-Throughput Mass Spectrometry with the Human Genome
Genome Biology 2005, 6(1)
PMID: 15642101
DOI: 10.1186/gb-2004-6-1-r9

Domon B, Aebersold R.
Mass spectrometry and protein analysis.
Science 2006, 312(5771), 212-217
PMID: 16614208
DOI: 10.1126/science.1124619

Lange V, Malmström JA, Didion J, King NL, Johansson BP, Schäfer J, Rameseder J, Wong CH, Deutsch EW, Brusniak MY, Bühlmann P, Björck L, Domon B, Aebersold R.
Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring.
Mol Cell Proteomics 2008, 7, 1489-1500
PMID: 18408245
DOI: 10.1074/mcp.M800032-MCP200

Eric W Deutsch, Henry Lam & Ruedi Aebersold
PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows
EMBO reports 2008, 9(5), 429-434
PMID: 18451766
DOI: 10.1038/embor.2008.56



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